R-universe - ashipunov (Alexey Shipunov)

tapkee - Wrapper for 'tapkee' Dimension Reduction Library

Wrapper for using 'tapkee' command line utility, it allows to run it from inside R and catch the results for further analysis and plotting. 'Tapkee' is a program for fast dimension reduction, see 'package?tapkee' and <http://tapkee.lisitsyn.me/> for installation and other details.

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2.00 score 9 scripts 181 downloads

kldtools - Kullback-Leibler Divergence and Other Tools to Analyze Frequencies

Most importantly, calculates Kullback-Leibler Divergence (KLD), Turing's perspective estimator and their confidence intervals.

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1.00 score 4 scripts 218 downloads

smirnov - Provides two taxonomic coefficients from E. S. Smirnov "Taxonomic analysis" (1969) book

This tiny package contains one function smirnov() which calculates two scaled taxonomic coefficients, Txy (coefficient of similarity) and Txx (coefficient of originality). These two characteristics may be used for the analysis of similarities between any number of taxonomic groups, and also for assessing uniqueness of giving taxon. It is possible to use smirnov() output as a distance measure: convert it to distance by "as.dist(1 - smirnov(x))".

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1.00 score 1 scripts 169 downloads